
International Workshop on
Applications of Machine Learning in Bioinformatics
of
2009 IEEE International Conference on Bioinformatics and Biomedicine
(IEEE BIBM 2009)
http://www.ittc.ku.edu/bioinformatics/BIBM09/home.php
November 1 - 4, 2009, Washington D.C., USA
Machine Learning techniques play an important role in Bioinformatics. As the accomplishment of human genome, techniques that can analyze large amount of data become urgent. Advances in Machine Learning and related techniques have played significant role in this task. This workshop aims to bring together researchers with expertise in machine learning, bioinformatics, and computational biology and provide a platform to the researchers to discuss recent advancements in the area of application of machine learning methods in field of bioinformatics.
Topics of interest include but not limited to:
- Sequence alignment
- Structural motif discovery
- Phylogenetics
- Primary genomic sequence
- Large-scale microarray gene expression data analysis
- Protein structure prediction
- Protein interaction network
- Protein-protein interface
- Biomarker discovery
- Management of genomics and proteomics data
- De novo peptide sequencing and spectral alignment
IMPORTANT DATES:
Full workshop papers submission due: August 10, 2009
Notification of acceptance: September 10, 2009
Camera-ready of accepted papers: October 1, 2007
The BIBM Conference: November 1 - 4, 2009
Program Chairs:
- Chair: Chunmei Liu, Howard University, chunmei@scs.howard.edu
- Co-Chair: Yinglei Song, University of Maryland, ysong@umes.edu
Program Committee Members:
Dongsheng Che, East Stroudsburg University
Junfeng Qu, Clayton State University
Hiroshi Mamitsuka, Kyoto University
Peng Qiu, Stanford University
Bernard Chen, University of Central Arkansas
Workshop Program:
(Nov. 1, 2009, Sunday, 10:15-1:15am, and 5:30pm-7pm; Hotel: Hyatt Conference room: Diplomat/Ambassador Room)
| Time | Paper Title | Authors |
| 10:15am-10:35am | Clustering Microarray Time-series Data using Expectation Maximization and Multiple Profile Alignment | Numanul Subhani, Luis Rueda, Alioune Ngom, and Conrad J. Burdeny |
| 10:35am-10:55am | A Comparison of Data Mining Approaches in the Categorization of Oral Anticoagulation Patients |
Francesco Archetti, Ilaria Giordani, Enza Messina, Giulia Ogliari, and Daniela Mari |
| 10:55am-11:15am |
Evaluation of Weight Matrix Models in the Splice Junction Recognition Problem |
Leonardo G. Tavares, Heitor S. Lopes, and Carlos R. Erig Lima |
| 11:15am-11:35am | Relational Clustering and Bayesian Networks for Linking Gene Expression Profiles and Drug Activity Patterns | E. Fersini, I. Giordani, E. Messina, and F. Archetti |
| 11:35am-11:55am | A Ground Truth Based Comparative Study on Detecting Epistatic SNPs |
Li Chen, Guoqiang Yu, David J. Miller, Lei Song, Carl Langefeld, David Herrington, Yongmei Liu, and Yue Wang |
| 11:55am-12:15pm |
A New Distance Distribution Paradigm to Detect the Variability of the Influenza-A Virus in High Dimensional Spaces |
Mosaab Daoud, Stefan C. Kremer |
| 12:15pm-12:35pm | CGM: A Biomedical Text Categorization Approach Using Concept Graph Mining | Said Bleik, Min Song, Aaron Smalter, Jun Huan, and Gerald Lushington |
| 12:35pm-12:55pm | On a General Method for Matrix Factorisation Applied to Supervised Classification | Vladimir Nikulin, Geoffrey J. McLachlan |
| 12:55pm- 1:15pm | Domain Content Based Protein Function Prediction Using Incomplete GO Annotation Information | Lirong Tan, Zhiwen Yu, and Hau-San Wong |
| 5:30pm-5:50pm |
Selection of Negative Examples in Learning Gene Regulatory Networks |
Michele Ceccarelli, Luigi Cerulo |
| 5:50pm-6:10pm |
A Novel Graph-based Selection Wrapper for Learning Enhancement in a Semi-supervised Manner |
Zhenggang Chang, Jieyue He, Wei Zhongy, and Yi Panz |
| 6:10pm-6:30pm |
A Graph Algorithm for Extracting Features from Transcription Factor Binding Sites |
Chunmei Liu, Yinglei Song, Junfeng Qu, and Anietie U. Andy |
| 6:30pm-6:50pm | Learning Parameters for Non-coding RNA Sequence-Structure Alignment | Yinglei Song, Chunmei Liu, and Junfeng Qu |